Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939577.1_cds_XP_016484113.1_75164
CDS Infomation

[gene=LOC107804695] [db_xref=GeneID:107804695] [protein=RNA polymerase sigma factor sigA-like] [protein_id=XP_016484113.1] [location=complement(join(139097..139205,139727..139839,140772..140834,141261..141338,141414..141467,141557..141685,141964..142056,142179..142377,143172..143860))] [gbkey=CDS]
Sequence

ATGATGGCCACAGCAGCAGTTATTGGACTTAGTGCAGGAAAAAGACTCCTAAGCTCTTCC
TTTTATTATTCCGATCTTAATGAAAAGCTAAATTGTACCAGTGGTCATAGTTTGCCCTGC
CATCAAGTTCCTTCTGTTAAGAATGTGATCACTGCGAAGAAGTCATCCGATTACAGCCCC
AGTTGCGTATCCAGTCGAAAACCACAATCCGCCAAGGCTCTTAAAGAGCACGTGGACATT
ACAGACGACCCTTCTGATGTGCCGTCCTGGTTTGAAATGTATGAACAATTGCAAAATGAA
AGCGATGATGAGGACGATTCGGTGGAGGTTCTCCTCTTGCTGCAGAAGTCTATGCTTGAA
AAGCAATGGAATCTTTCTCTTGAGCAGACATTGATAGCTTCTCCGCAACATGAAAAGAAA
AGTAAGAAGACGCATATTACTTGCTCAGGGACATCTGCTAGGCGGAGGAGAATGGATTCT
CGACAAAGAGTTCTTGACCGAAATATTTCAGCTACACCAACCATTGCAGCCAAGCCACTG
AGATCAATTATTGGTCCAGAGCTACTTCAAAATCGTTTAAAAGGTTACGTTAAGGGTGTA
GTAAGCGAAGAACTGCTCACACATGCTGAAGTGCTTCAACTATCCAAAAAAATTCAAGTT
GGCCTTTATTTGGAAGAGCAGAAATCCAGGCTGAAGGAAAGATTGGGATGCGAGCCTTCG
GATGATCAACTTGCTGTTTCCTTGAAAATGTCACGTACTGATCTACAATCTACATTGATC
GAGTGTTCCTTGGCAAGAGAAAGGCTTGCAATGAGCAATGTTCGTCTTGTCATGTCAATT
GCTCAAAGATATGATAACGTGGGTGCTGAAATGGCTGACCTCGTTCAGGGAGGCCTTATT
GGGCTGCTTCGTGGGATAGAGAAATTTGATCCCTCTAAAGGATACAAAATCTCAACTTAT
GTTTATTGGTGGATTCGCCAGGGTGTCTCGAGAGCGCTGGTTGAGAATTCACGAACCTTA
AGATTGCCAACATATCTGCATGAAAGACTCAGTCTAATCCGTAATGCAAAGACGAGGCTT
GAAGAAAAGGGAATAATTCCATCTGTAAATGATATAGCTGCATCCCTAAATATGTCCCAG
AAGAAAGTCAGGAATGCAACTGAGGCAAGCAGCAAGATGTATTCACTTGACAGGGAAGCA
TTTCCCTCTTTAAATGGTCTCCCTGGAGAAACCCTTCATAGTTACATCGCTGATAACCAT
CTGGAGAACAACCCATGGCATGGTGTCGATATATGGGCACTCAAGGATGAAGTAAACAAC
CTCATTTCGTCAACTCTTAGGGATAGAGAGAGGGAGATTATCCGACTGTACTATGGTCTG
GACAATGAATGTCTCACCTGGGAGGATATTAGTAAAAGGATAGGTTTGTCCAGAGAAAGG
GTCAGACAGGTGGGATTAGTTGCACTTGAGAAACTAAAACATGCTGCAAGGAAAAGGCAA
CTAGACGCAATGTTGATCAAACAGTGA

Peptide Sequence

PEP ID

XP_016484113.1
PEP Infomation

PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana tabacum]
Sequence

MMATAAVIGLSAGKRLLSSSFYYSDLNEKLNCTSGHSLPCHQVPSVKNVITAKKSSDYSP
SCVSSRKPQSAKALKEHVDITDDPSDVPSWFEMYEQLQNESDDEDDSVEVLLLLQKSMLE
KQWNLSLEQTLIASPQHEKKSKKTHITCSGTSARRRRMDSRQRVLDRNISATPTIAAKPL
RSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPS
DDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLI
GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKTRL
EEKGIIPSVNDIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNH
LENNPWHGVDIWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRER
VRQVGLVALEKLKHAARKRQLDAMLIKQ

Transcript Sequence

Gene sequence data has not been registered.